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11.
12.
An extension of the classification of evolutionarily singular strategies in Adaptive dynamics
Barbara Boldin, Odo Diekmann, 2017, objavljeni povzetek znanstvenega prispevka na konferenci

Ključne besede: adaptive dynamics, mathematical model, infectious disease, virulence
Objavljeno v RUP: 16.01.2018; Ogledov: 1800; Prenosov: 0

13.
Using words from daily news headlines to predict the movement of stock market indices
Branko Kavšek, 2017, izvirni znanstveni članek

Ključne besede: adaptive dynamics, mathematical model, infectious disease, virulence
Objavljeno v RUP: 15.01.2018; Ogledov: 2827; Prenosov: 138
.pdf Celotno besedilo (344,31 KB)

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Evolutionary suicide of pathogens
Barbara Boldin, Éva Kisdi, 2017, objavljeni povzetek znanstvenega prispevka na konferenci

Ključne besede: adaptivna dinamika, matematični model, nalezljiva bolezen, virulenca, adaptive dynamics, mathematical model, infectious disease, virulence
Objavljeno v RUP: 16.11.2017; Ogledov: 3224; Prenosov: 18
URL Povezava na celotno besedilo

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H274Y's effect on oseltamivir resistance : what happens before the drug enters the binding site
Muhammad Yusuf, Nornisah Mohamed, Suriyati Mohamad, Dušanka Janežič, K. V. Damodaran, Habibah A. Wahab, 2016, izvirni znanstveni članek

Opis: Increased reports of oseltamivir (OTV)-resistant strains of the influenza virus, such as the H274Y mutation on its neuraminidase (NA), have created some cause for concern. Many studies have been conducted in the attempt to uncover the mechanism of OTV resistance in H274Y NA. However, most of the reported studies on H274Y focused only on the drug-bound system, so the direct effects of the mutation on NA itself prior to drug binding still remain unclear. Therefore, molecular dynamics simulations of NA in apo form, followed by principal component analysis and interaction energy calculations, were performed to investigate the structural changes of the NA binding site as a result of the H274Y mutation. It was observed that the disruption of the NA binding site due to the H274Y mutation was initiated by the repulsive effect of Y274 on the 250-loop, which in turn altered the hydrogen-bonding network around residue 274. The rotated W295 side chain caused the upward movement of the 340-loop. Consequently, sliding box docking results suggested that the binding pathway of OTV was compromised because of the disruption of this binding site. This study also highlighted the importance of the functional group at C6 of the sialic acid mimicry. It is hoped that these results will improve the understanding of OTV resistance and shed some light on the design of a novel anti-influenza drug.
Ključne besede: influenza, neuraminidase, H274Y, oseltamivir, molecular dynamics
Objavljeno v RUP: 08.08.2016; Ogledov: 2672; Prenosov: 144
URL Povezava na celotno besedilo

20.
An extension of the classification of evolutionarily singular strategies in Adaptive dynamics
Barbara Boldin, 2016, objavljeni povzetek znanstvenega prispevka na konferenci

Ključne besede: adaptive dynamics, mathematical model, infectious disease, virulence
Objavljeno v RUP: 08.08.2016; Ogledov: 2223; Prenosov: 26
URL Povezava na celotno besedilo

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