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1.

Reconstructing perfect phylogenies via branchings in acyclic digraphs : a new lower bound and efficiently solvable cases
Narmina Baghirova, 2020, master's thesis

Keywords: perfect phylogeny, minimum conflict-free row split problem, minimum uncovering branching problem, branching, acyclic digraph, chain partition, Dilworth's theorem
Published in RUP: 07.08.2020; Views: 2747; Downloads: 80
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2.

MIPUP : minimum perfect unmixed phylogenies for multi-sampled tumors via branchings and ILP
Edin Husić, Xinyue Li, Ademir Hujdurović, Miika Mehine, Romeo Rizzi, Veli Mäkinen, Martin Milanič, Alexandru I. Tomescu, 2018, original scientific article

Keywords: perfect phylogeny, minimum conflict-free row split problem, branching, acyclic digraph, integer linear programming
Published in RUP: 17.09.2018; Views: 3173; Downloads: 119
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3.

Perfect phylogenies via branchings in acyclic digraphs and a generalization of Dilworth's theorem
Ademir Hujdurović, Edin Husić, Martin Milanič, Romeo Rizzi, Alexandru I. Tomescu, 2018, original scientific article

Keywords: perfect phylogeny, minimum conflict-free row split problem, branching, acyclic digraph, chain partition, Dilworth's theorem, min-max theorem, approximation algorithm, APXhardness
Published in RUP: 08.05.2018; Views: 3371; Downloads: 160
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4.

The minimum conflict-free row split problem revisited
Ademir Hujdurović, Edin Husić, Martin Milanič, Romeo Rizzi, Alexandru I. Tomescu, 2016, published scientific conference contribution

Keywords: #the #minimum conflict-free row split problem, branching, Dilworth's theorem, min-max theorem, approximation algorithm, APX-hardness
Published in RUP: 14.11.2017; Views: 4047; Downloads: 283
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5.

Finding a perfect phylogeny from mixed tumor samples
Ademir Hujdurović, Urša Kačar, Martin Milanič, Bernard Ries, Alexandru I. Tomescu, 2015, published scientific conference contribution

Keywords: perfect phylogeny, conflict-free matrix, conflict-free row split, row-conflict graph
Published in RUP: 08.08.2016; Views: 4520; Downloads: 149
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