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Title:The Tree of Sex consortium : a global initiative for studying the evolution of reproduction in eukaryotes
Authors:ID Jeffries, Daniel (Author)
ID Benvenuto, Chiara (Author)
ID Böhne, Astrid (Author)
ID Fraïsse, Christelle (Author)
ID Garcia, Sònia (Author)
ID Jay, Paul (Author)
ID Kratochvíl, Lukáš (Author)
ID McDonough-Goldstein, Caitlin E. (Author)
ID Ruiz-Herrera, Aurora (Author)
ID Sotero-Caio, Cibele G. (Author)
ID Glasnović, Peter (Author)
Files:.pdf RAZ_Jeffries_Daniel_2025.pdf (2,26 MB)
MD5: D8D35A49F8F4E81C47429C16B0BA05CC
 
URL https://academic.oup.com/jeb/article/38/7/861/8126803
 
Language:English
Work type:Article
Typology:1.02 - Review Article
Organization:FAMNIT - Faculty of Mathematics, Science and Information Technologies
Abstract:Reproduction is a fundamental aspect of life that affects all levels of biology, from genomes and development to population dynamics and diversification. The first Tree of Sex database synthesized a vast diversity of reproductive strategies and their intriguing distribution throughout eukaryotes. A decade on, we are reviving this initiative and greatly expanding its scope to provide the most comprehensive integration of knowl- edge on eukaryotic reproduction to date. In this perspective, we first identify important gaps in our current knowledge of reproductive strategies across eukaryotes. We then highlight a selection of questions that will benefit most from this new Tree of Sex project, including those related to the evolution of sex, modes of sex determination, sex chromosomes, and the consequences of various reproductive strategies. Finally, we out- line our vision for the new Tree of Sex database and the consortium that will create it (treeofsex.org). The new database will cover all Eukaryota and include a wide selection of biological traits. It will also incorporate genomic data types that were scarce or non-existent at the time of the first Tree of Sex initiative. The new database will be publicly accessible, stable, and self-sustaining, thus greatly improving the accessibility of reproductive knowledge to researchers across disciplines for years to come. Lastly, the consortium will persist after the database is created to serve as a collaborative framework for research, prioritizing ethical standards in the collection, use, and sharing of reproductive data. The new Tree of Sex consortium is open, and we encourage all who are interested in this topic to join us.
Keywords:biodiversity, asexual reproduction, sexual reproduction, sex chromosomes, sex determination, database, ontology
Publication version:Version of Record
Publication date:08.05.2025
Year of publishing:2025
Number of pages:str. 861-886
Numbering:Vol. 38, iss. 7
PID:20.500.12556/RUP-23472 This link opens in a new window
UDC:574.1:57.017.5
ISSN on article:1420-9101
DOI:10.1093/jeb/voaf053 This link opens in a new window
COBISS.SI-ID:287734275 This link opens in a new window
Publication date in RUP:13.08.2026
Views:31
Downloads:3
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Record is a part of a journal

Title:Journal of evolutionary biology
Shortened title:J. evol. biol.
Publisher:Birkhäuser
ISSN:1420-9101
COBISS.SI-ID:517757977 This link opens in a new window

Licences

License:CC BY 4.0, Creative Commons Attribution 4.0 International
Link:http://creativecommons.org/licenses/by/4.0/
Description:This is the standard Creative Commons license that gives others maximum freedom to do what they want with the work as long as they credit the author.

Secondary language

Language:Slovenian
Abstract:Razmnoževanje je temeljni vidik življenja, ki vpliva na vse ravni biologije, od genomov in razvoja do populacijske dinamike in diverzifikacije. Prva podatkovna zbirka Tree of Sex je sistematično povezala izjemno raznolikost razmnoževalnih strategij in njihovo zanimivo razširjenost med evkarionti. Desetletje pozneje to pobudo oživljamo in močno širimo njen obseg, da bi zagotovili doslej najcelovitejšo integracijo znanja o razmnoževanju evkariontov. V tem preglednem prispevku najprej opredelimo pomembne vrzeli v našem sedanjem poznavanju razmnoževalnih strategij pri evkariontih. Nato izpostavimo izbor vprašanj, pri katerih bo ta novi projekt Tree of Sex najbolj koristil, vključno z vprašanji, povezanimi z evolucijo spola, načini določanja spola, spolnimi kromosomi in posledicami različnih razmnoževalnih strategij. Nazadnje predstavimo našo vizijo nove podatkovne zbirke Tree of Sex in konzorcija, ki jo bo ustvaril (treeofsex.org). Nova podatkovna zbirka bo zajemala vse evkarionte in vključevala širok izbor bioloških lastnosti. Vključevala bo tudi vrste genomskih podatkov, ki so bile v času prve pobude Tree of Sex redke ali pa jih sploh ni bilo. Nova podatkovna zbirka bo javno dostopna, stabilna in samovzdržna, s čimer bo raziskovalcem z različnih področij za več let znatno izboljšan dostop do znanja o razmnoževanju. Konzorcij bo po vzpostavitvi podatkovne zbirke še naprej deloval kot sodelovalni okvir za raziskave ter pri zbiranju, uporabi in izmenjavi podatkov o razmnoževanju dajal prednost etičnim standardom. Novi konzorcij Tree of Sex je odprt in vabimo vse, ki jih ta tematika zanima, da se nam pridružijo.
Keywords:biotska raznovrstnost, nespolno razmnoževanje, spolno razmnoževanje, spolni kromosomi, določanje spola, podatkovne baze, ontologija


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